fix(cli): Rename `hyperlane config create chain` -> `hyperlane registry init` (#3978)

### Description
Renames `hyperlane config create chain` -> `hyperlane registry init` as
according to
https://www.notion.so/hyperlanexyz/Must-use-config-to-create-a-new-chain-instead-of-the-registry-command-f7b407b29a834f7288f20e4c08bc206e?pvs=4

### Drive-by changes
- Rename `configure` to `init` for all functions
- Reorder functions alphabetically 

### Backward compatibility
No

### Testing

Manual

.changeset/giant-lies-whisper.md

@@ -0,0 +1,5 @@
+---
+'@hyperlane-xyz/cli': minor
+---
+
+Rename hyperlane config create chain -> hyperlane registry init. Rename all `configure` to `init`

typescript/cli/src/commands/config.ts

@@ -1,6 +1,6 @@
 import { CommandModule } from 'yargs';
 
-import { createChainConfig, readChainConfigs } from '../config/chain.js';
+import { readChainConfigs } from '../config/chain.js';
 import { readIsmConfig } from '../config/ism.js';
 import { readMultisigConfig } from '../config/multisig.js';
 import { readWarpRouteDeployConfig } from '../config/warp.js';
@@ -16,34 +16,10 @@ export const configCommand: CommandModule = {
   command: 'config',
   describe: 'Create or validate Hyperlane configs',
   builder: (yargs) =>
-    yargs
-      .command(createCommand)
-      .command(validateCommand)
-      .version(false)
-      .demandCommand(),
-  handler: () => log('Command required'),
-};
-
-/**
- * Create commands
- */
-const createCommand: CommandModule = {
-  command: 'create',
-  describe: 'Create a new Hyperlane config',
-  builder: (yargs) =>
-    yargs.command(createChainConfigCommand).version(false).demandCommand(),
+    yargs.command(validateCommand).version(false).demandCommand(),
   handler: () => log('Command required'),
 };
 
-const createChainConfigCommand: CommandModuleWithContext<{}> = {
-  command: 'chain',
-  describe: 'Create a new, minimal Hyperlane chain config (aka chain metadata)',
-  handler: async ({ context }) => {
-    await createChainConfig({ context });
-    process.exit(0);
-  },
-};
-
 /**
  * Validate commands
  */

typescript/cli/src/commands/core.ts

@@ -32,8 +32,8 @@ export const coreCommand: CommandModule = {
   describe: 'Manage core Hyperlane contracts & configs',
   builder: (yargs) =>
     yargs
-      .command(configure)
       .command(deploy)
+      .command(init)
       .command(read)
       .version(false)
       .demandCommand(),
@@ -82,11 +82,11 @@ export const deploy: CommandModuleWithWriteContext<{
   },
 };
 
-export const configure: CommandModuleWithContext<{
+export const init: CommandModuleWithContext<{
   advanced: boolean;
   config: string;
 }> = {
-  command: 'configure',
+  command: 'init',
   describe: 'Create a core configuration, including ISMs and hooks.',
   builder: {
     advanced: {

typescript/cli/src/commands/registry.ts

@@ -1,6 +1,7 @@
 import { CommandModule } from 'yargs';
 
 import { createAgentConfig } from '../config/agent.js';
+import { createChainConfig } from '../config/chain.js';
 import { CommandContext, CommandModuleWithContext } from '../context/types.js';
 import { log, logBlue, logGray, logRed, logTable } from '../logger.js';
 
@@ -15,12 +16,13 @@ import { ChainType, ChainTypes } from './types.js';
  */
 export const registryCommand: CommandModule = {
   command: 'registry',
-  describe: 'View information about Hyperlane chains in a registry',
+  describe: 'Manage Hyperlane chains in a registry',
   builder: (yargs) =>
     yargs
-      .command(listCommand)
       .command(addressesCommand)
       .command(createAgentConfigCommand)
+      .command(initCommand)
+      .command(listCommand)
       .version(false)
       .demandCommand(),
   handler: () => log('Command required'),
@@ -140,3 +142,12 @@ const createAgentConfigCommand: CommandModuleWithContext<{
     process.exit(0);
   },
 };
+
+const initCommand: CommandModuleWithContext<{}> = {
+  command: 'init',
+  describe: 'Create a new, minimal Hyperlane chain config (aka chain metadata)',
+  handler: async ({ context }) => {
+    await createChainConfig({ context });
+    process.exit(0);
+  },
+};

typescript/cli/src/commands/warp.ts

@@ -43,8 +43,8 @@ export const warpCommand: CommandModule = {
   describe: 'Manage Hyperlane warp routes',
   builder: (yargs) =>
     yargs
-      .command(configure)
       .command(deploy)
+      .command(init)
       .command(read)
       .command(send)
       .version(false)
@@ -82,11 +82,11 @@ export const deploy: CommandModuleWithWriteContext<{
   },
 };
 
-export const configure: CommandModuleWithContext<{
+export const init: CommandModuleWithContext<{
   advanced: boolean;
   out: string;
 }> = {
-  command: 'configure',
+  command: 'init',
   describe: 'Create a warp route configuration.',
   builder: {
     advanced: {